BD-STEP Fellows at VA Palo Alto Health Care System
Current VA Palo Alto BD-STEP Fellows
Linda (Diem) Tran, MPP, PhD. Dr. Tran has a Master of Public Policy degree and a PhD in Health Policy and Management from UCLA.
Hoda Abdel Magid, MPH, DPhil. Dr. Abdel Magid has a MPH from Johns Hopkins University and a Doctor of Philosophy from UC Berkeley.
Andrew Chang, MS, PhD. Dr. Chang has a MS in Biomedical Informatics from the University of Texas Health Science Center at Houston and a PhD in Biochemistry and Cell Biology from Rice University.
Using machine learning and big-data for better disease prediction and prevention: By combining the machine learning technology and the tremendous HER database of the VA system, we can search for possible patterns and factors of these fast-developing cancers that were previously ignored or neglected by humans.
Steven Cogill, MS, PhD. Dr. Cogill has a PhD in Genetics/Bioinformatics from Clemson University and a MS in Biochemistry/Biotech from IU School of Medicine.
Data mining techniques for the identification of post chemotherapy sepsis risk: Given that sepsis accounts for ~10% of cancer deaths in the US, particularly for post chemotherapy patients with neutropenic fever, better sepsis diagnostic/prognostic tool would enable improved sepsis management in cancer patients. We will mine available VA data on cancer patients with ED visits to identify predictors for various clinical or operational outcomes using novel machine-learning approaches.
Kent Heberer, MS, PhD. Dr. Heberer has a MS and PhD in Biomedical Engineering from UCLA.
Clinical predictors of outcomes to cancer treatments: Predictive analytics and existing natural language processing tools will be used to identify clinical predictors for treatment outcomes. These outcomes include treatment response, side effects and complications, remission/NED, quality of life and frailty measures, and survival. Eventually, the intent is to construct a core pipeline framework that can be customized and scalable for any cancer type, and be updated with the entry of new patients. Importantly, this pipeline can be used for future research and clinical operations in real-time to inform actionable strategies for the local, regional, and national levels of the VA healthcare system.
Former VA Palo Alto BD-STEP Fellows
Joanna Sylman, PhD. Dr. Sylman has a PhD in Chemical and Biomedical Engineering from Oregon Health and Science University.
Utilization of longitudinal complete blood count information to improve cancer patient detection and prognosis: This project focuses on leveraging longitudinal complete blood count information, particularly platelets, neutrophils, lymphocytes, and albumin in an effort to detect cancer in early stages and improve patient prognosis predictions. Machine learning approaches and traditional epidemiological methods will be compared to determine the potential added value of these readily available measurements in Veteran patient medical health records.
Wen-Wai Yim, PhD. Dr. Yim has a PhD in Biomedical Informatics from the University of Washington.
Development and validation of surgery and pain-related quality metrics: Using structured and unstructured VA data to study outcomes and develop/evaluate quality metrics for quality improvement.
Lesley Park, MPH, MPhil, PhD. Dr. Park has a MPH in Chronic Disease Epidemiology, a MPhil in Epidemiology, and a PhD in Chronic Disease Epidemiology from Yale University.
The National BD-STEP program has compiled a list of publications by all BD-STEP Fellows during their time in the BD-STEP program: https://cssi.cancer.gov/about-us/cssi-offices/office-director/pilot-programs/big-data-scientist-training-enhancement/selected-fellow-publications
Last updated: 2019-04-09